Dca41721.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4641)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41721.1 |
2 |
480 |
502 |
57.56 |
479 |
60 |
4e-178
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
33 |
519 |
964 |
50.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41721.1 |
23 |
480 |
502 |
32.86 |
458 |
32 |
9e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
452 |
963 |
1401 |
36.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4641 |
Augustus |
mRNA |
24374 |
29073 |
. |
- |
. |
ID=Dca41721.1;Parent=Dca41721 |
| scaffold4641 |
Augustus |
exon |
24374 |
24444 |
. |
- |
. |
ID=Dca41721.1.exon1;Parent=Dca41721.1 |
| scaffold4641 |
Augustus |
exon |
27636 |
29073 |
. |
- |
. |
ID=Dca41721.1.exon2;Parent=Dca41721.1 |
