Carnation DB

Dca41752.1

Annotation

8-exons
f-1
sp|B9I0X5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_569328#GO:0008168#1F0P0C
sp|B9T6A2_RICCO#Protein C9orf32, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0140300#GO:0008168#1F0P0C
Repeat List (scaffold465)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41752.1	1	280	280	69.64	280	70	3e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9I0X5_POPTR	1	276	276	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41752.1	1	280	280	66.07	280	66	4e-109
Target_name	Start	End	Length	Cov(%)
AT5G44450.1	59	334	334	82.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold465	Augus-PASA	mRNA	45257	52987	.	+	.	ID=Dca41752.1;Parent=Dca41752
scaffold465	Augus-PASA	exon	45257	45394	.	+	.	ID=Dca41752.1.exon1;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	45843	45987	.	+	.	ID=Dca41752.1.exon2;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	46869	46927	.	+	.	ID=Dca41752.1.exon3;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	48010	48129	.	+	.	ID=Dca41752.1.exon4;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	48320	48421	.	+	.	ID=Dca41752.1.exon5;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	50095	50149	.	+	.	ID=Dca41752.1.exon6;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	51570	51667	.	+	.	ID=Dca41752.1.exon7;Parent=Dca41752.1
scaffold465	Augus-PASA	exon	52862	52987	.	+	.	ID=Dca41752.1.exon8;Parent=Dca41752.1