Carnation DB

Dca41898.1

Annotation

5-exons
f-1
sp|G7IP72_MEDTR#Exosome complex exonuclease RRP45#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g019210#GO:0004527;GO:0003723;GO:0006396#2F1P0C
Repeat List (scaffold468)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41898.1	1	262	262	76.33	262	77	1e-124
Target_name	Start	End	Length	Cov(%)
sp\|G7IP72_MEDTR	1	262	449	58.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41898.1	1	262	262	77.09	262	78	3e-116
Target_name	Start	End	Length	Cov(%)
AT3G60500.1	1	262	438	59.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold468	Augus-PASA	mRNA	78389	80491	.	+	.	ID=Dca41898.1;Parent=Dca41898
scaffold468	Augus-PASA	exon	78389	78525	.	+	.	ID=Dca41898.1.exon1;Parent=Dca41898.1
scaffold468	Augus-PASA	exon	78844	79053	.	+	.	ID=Dca41898.1.exon2;Parent=Dca41898.1
scaffold468	Augus-PASA	exon	79509	79604	.	+	.	ID=Dca41898.1.exon3;Parent=Dca41898.1
scaffold468	Augus-PASA	exon	79699	79894	.	+	.	ID=Dca41898.1.exon4;Parent=Dca41898.1
scaffold468	Augustus	exon	80342	80491	.	+	.	ID=Dca41898.1.exon5;Parent=Dca41898.1