Carnation DB

Dca41920.1

Annotation

7-exons
f-1
sp|D7LZS1_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487469#unknown#0F0P0C
Repeat List (scaffold4682)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41920.1	1	273	274	48.17	273	42	2e-58
Target_name	Start	End	Length	Cov(%)
sp\|D7LZS1_ARALL	1	314	315	99.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41920.1	1	273	274	47.08	273	42	1e-58
Target_name	Start	End	Length	Cov(%)
AT5G06590.1	1	313	314	99.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4682	Augus-PASA	mRNA	5104	10154	.	+	.	ID=Dca41920.1;Parent=Dca41920
scaffold4682	Augus-PASA	exon	5104	5215	.	+	.	ID=Dca41920.1.exon1;Parent=Dca41920.1
scaffold4682	Augus-PASA	exon	5383	5586	.	+	.	ID=Dca41920.1.exon2;Parent=Dca41920.1
scaffold4682	Augus-PASA	exon	8172	8295	.	+	.	ID=Dca41920.1.exon3;Parent=Dca41920.1
scaffold4682	Augustus	exon	8435	8505	.	+	.	ID=Dca41920.1.exon4;Parent=Dca41920.1
scaffold4682	Augustus	exon	8995	9107	.	+	.	ID=Dca41920.1.exon5;Parent=Dca41920.1
scaffold4682	Augus-PASA	exon	9241	9346	.	+	.	ID=Dca41920.1.exon6;Parent=Dca41920.1
scaffold4682	Augus-PASA	exon	10060	10154	.	+	.	ID=Dca41920.1.exon7;Parent=Dca41920.1