Carnation DB

Dca41955.1

Annotation

5-exons
f-1
sp|A9PAW1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_835769#GO:0015935;GO:0003723;GO:0003735;GO:0006412#2F1P1C
AT5G35530.1 | Symbols: | Ribosomal protein S3 family protein | chr5:13710355-13712192 REVERSE LENGTH=248
Repeat List (scaffold469)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41955.1	1	224	238	88.65	224	95	7e-122
Target_name	Start	End	Length	Cov(%)
sp\|A9PAW1_POPTR	1	224	234	95.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41955.1	1	222	238	84.03	222	91	2e-117
Target_name	Start	End	Length	Cov(%)
AT5G35530.1	1	222	248	89.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold469	Augustus	mRNA	71095	73440	.	-	.	ID=Dca41955.1;Parent=Dca41955
scaffold469	Augustus	exon	71095	71274	.	-	.	ID=Dca41955.1.exon1;Parent=Dca41955.1
scaffold469	Augustus	exon	71390	71521	.	-	.	ID=Dca41955.1.exon2;Parent=Dca41955.1
scaffold469	Augustus	exon	71633	71687	.	-	.	ID=Dca41955.1.exon3;Parent=Dca41955.1
scaffold469	Augustus	exon	72989	73160	.	-	.	ID=Dca41955.1.exon4;Parent=Dca41955.1
scaffold469	Augustus	exon	73263	73440	.	-	.	ID=Dca41955.1.exon5;Parent=Dca41955.1