Carnation DB

Dca41969.1

Annotation

5-exons
f-1
sp|B9GJY7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_753633#GO:0016021;GO:0055085#0F1P1C
AT1G76520.1 | Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390
Repeat List (scaffold4691)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41969.1	15	223	223	52.01	209	55	2e-59
Target_name	Start	End	Length	Cov(%)
sp\|B9GJY7_POPTR	173	374	374	54.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41969.1	13	223	223	49.32	211	49	5e-54
Target_name	Start	End	Length	Cov(%)
AT1G76520.1	182	390	390	53.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4691	Augustus	mRNA	19939	22149	.	+	.	ID=Dca41969.1;Parent=Dca41969
scaffold4691	Augustus	exon	19939	20121	.	+	.	ID=Dca41969.1.exon1;Parent=Dca41969.1
scaffold4691	Augustus	exon	21066	21166	.	+	.	ID=Dca41969.1.exon2;Parent=Dca41969.1
scaffold4691	Augustus	exon	21530	21582	.	+	.	ID=Dca41969.1.exon3;Parent=Dca41969.1
scaffold4691	Augustus	exon	21744	21929	.	+	.	ID=Dca41969.1.exon4;Parent=Dca41969.1
scaffold4691	Augustus	exon	22001	22149	.	+	.	ID=Dca41969.1.exon5;Parent=Dca41969.1