Carnation DB

Dca42.1

Annotation

8-exons
f-1
sp|B9IDW7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_807853#GO:0016021#0F0P1C
AT5G53130.1 | Symbols: CNGC1, ATCNGC1 | cyclic nucleotide gated channel 1 | chr5:21537830-21540490 REVERSE LENGTH=716
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42.1	12	722	723	59.75	711	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IDW7_POPTR	2	708	708	99.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42.1	16	722	723	59.19	707	58	0
Target_name	Start	End	Length	Cov(%)
AT5G53130.1	6	716	716	99.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	428419	433238	.	-	.	ID=Dca42.1;Parent=Dca42
scaffold1	Augustus	exon	428419	428728	.	-	.	ID=Dca42.1.exon1;Parent=Dca42.1
scaffold1	Augustus	exon	429257	429594	.	-	.	ID=Dca42.1.exon2;Parent=Dca42.1
scaffold1	Augustus	exon	430052	430288	.	-	.	ID=Dca42.1.exon3;Parent=Dca42.1
scaffold1	Augustus	exon	430575	430686	.	-	.	ID=Dca42.1.exon4;Parent=Dca42.1
scaffold1	Augustus	exon	431014	431309	.	-	.	ID=Dca42.1.exon5;Parent=Dca42.1
scaffold1	Augustus	exon	431581	431793	.	-	.	ID=Dca42.1.exon6;Parent=Dca42.1
scaffold1	Augustus	exon	432333	432939	.	-	.	ID=Dca42.1.exon7;Parent=Dca42.1
scaffold1	Augustus	exon	433180	433238	.	-	.	ID=Dca42.1.exon8;Parent=Dca42.1