Carnation DB

Dca42017.1

Annotation

5-exons
f-1
sp|F6HKF5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04220#GO:0005524;GO:0004674#2F0P0C
AT3G53030.1 | Symbols: SRPK4 | ser/arg-rich protein kinase 4 | chr3:19662412-19664362 FORWARD LENGTH=529
Repeat List (scaffold47)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42017.1	23	530	546	74.17	508	75	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HKF5_VITVI	3	541	557	96.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42017.1	25	521	546	68.49	497	73	0
Target_name	Start	End	Length	Cov(%)
AT3G53030.1	2	510	529	96.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold47	Augustus	mRNA	128208	134170	.	+	.	ID=Dca42017.1;Parent=Dca42017
scaffold47	Augustus	exon	128208	128471	.	+	.	ID=Dca42017.1.exon1;Parent=Dca42017.1
scaffold47	Augustus	exon	128857	129436	.	+	.	ID=Dca42017.1.exon2;Parent=Dca42017.1
scaffold47	Augustus	exon	129524	129834	.	+	.	ID=Dca42017.1.exon3;Parent=Dca42017.1
scaffold47	Augustus	exon	133608	133655	.	+	.	ID=Dca42017.1.exon4;Parent=Dca42017.1
scaffold47	Augustus	exon	133733	134170	.	+	.	ID=Dca42017.1.exon5;Parent=Dca42017.1