Carnation DB

Dca42018.1

Annotation

12-exons
f-1
sp|B9MTM3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836253#GO:0016021#0F0P1C
AT2G36630.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:15352767-15355050 REVERSE LENGTH=459
Repeat List (scaffold47)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42018.1	1	465	465	72.9	465	73	3e-178
Target_name	Start	End	Length	Cov(%)
sp\|B9MTM3_POPTR	1	460	460	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42018.1	3	465	465	68.17	463	69	1e-166
Target_name	Start	End	Length	Cov(%)
AT2G36630.1	9	459	459	98.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold47	Augus-PASA	mRNA	136763	141307	.	-	.	ID=Dca42018.1;Parent=Dca42018
scaffold47	Augus-PASA	exon	136763	136845	.	-	.	ID=Dca42018.1.exon1;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	136943	137083	.	-	.	ID=Dca42018.1.exon2;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	137632	137725	.	-	.	ID=Dca42018.1.exon3;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	138552	138791	.	-	.	ID=Dca42018.1.exon4;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	138988	139038	.	-	.	ID=Dca42018.1.exon5;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	139240	139326	.	-	.	ID=Dca42018.1.exon6;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	139490	139545	.	-	.	ID=Dca42018.1.exon7;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	139665	139713	.	-	.	ID=Dca42018.1.exon8;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	139823	139884	.	-	.	ID=Dca42018.1.exon9;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	140291	140491	.	-	.	ID=Dca42018.1.exon10;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	140856	141015	.	-	.	ID=Dca42018.1.exon11;Parent=Dca42018.1
scaffold47	Augus-PASA	exon	141134	141307	.	-	.	ID=Dca42018.1.exon12;Parent=Dca42018.1