Carnation DB

Dca42043.1

Annotation

15-exons
f-1
sp|D7TKV8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00110#GO:0016021;GO:0006810#0F1P1C
AT5G01010.2 | Symbols: | EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:1388-4924 REVERSE LENGTH=479
Repeat List (scaffold47)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42043.1	1	429	431	71.92	429	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TKV8_VITVI	1	431	439	98.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42043.1	1	428	431	67.98	428	63	2e-168
Target_name	Start	End	Length	Cov(%)
AT5G01010.2	1	471	479	98.32

seqname	source	feature	start	end	score	strand	frame	group
scaffold47	Augus-PASA	mRNA	353788	362219	.	-	.	ID=Dca42043.1;Parent=Dca42043
scaffold47	Augus-PASA	exon	353788	353844	.	-	.	ID=Dca42043.1.exon1;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	355383	355457	.	-	.	ID=Dca42043.1.exon2;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	355533	355568	.	-	.	ID=Dca42043.1.exon3;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	355682	355729	.	-	.	ID=Dca42043.1.exon4;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	355966	356040	.	-	.	ID=Dca42043.1.exon5;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	357088	357136	.	-	.	ID=Dca42043.1.exon6;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	357265	357327	.	-	.	ID=Dca42043.1.exon7;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	357435	357515	.	-	.	ID=Dca42043.1.exon8;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	357697	357813	.	-	.	ID=Dca42043.1.exon9;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	358858	358898	.	-	.	ID=Dca42043.1.exon10;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	359108	359186	.	-	.	ID=Dca42043.1.exon11;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	359268	359424	.	-	.	ID=Dca42043.1.exon12;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	360465	360594	.	-	.	ID=Dca42043.1.exon13;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	361205	361332	.	-	.	ID=Dca42043.1.exon14;Parent=Dca42043.1
scaffold47	Augus-PASA	exon	362060	362219	.	-	.	ID=Dca42043.1.exon15;Parent=Dca42043.1