Dca42133.1
Annotation
- 4-exons
- f-1
- sp|A5AKG6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_006643#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Os08t0177800-00 Similar to RNase H domain-containing protein.
- Repeat List (scaffold4714)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42133.1 |
16 |
480 |
574 |
29.44 |
465 |
33 |
4e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AKG6_VITVI |
256 |
721 |
916 |
50.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42133.1 |
104 |
246 |
574 |
9.4 |
143 |
37 |
6e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0177800-00 |
189 |
330 |
352 |
40.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4714 |
Augustus |
mRNA |
672 |
3685 |
. |
- |
. |
ID=Dca42133.1;Parent=Dca42133 |
| scaffold4714 |
Augustus |
exon |
672 |
871 |
. |
- |
. |
ID=Dca42133.1.exon1;Parent=Dca42133.1 |
| scaffold4714 |
Augustus |
exon |
1835 |
2049 |
. |
- |
. |
ID=Dca42133.1.exon2;Parent=Dca42133.1 |
| scaffold4714 |
Augustus |
exon |
2171 |
3237 |
. |
- |
. |
ID=Dca42133.1.exon3;Parent=Dca42133.1 |
| scaffold4714 |
Augustus |
exon |
3443 |
3685 |
. |
- |
. |
ID=Dca42133.1.exon4;Parent=Dca42133.1 |
