Carnation DB

Dca42156.1

Annotation

9-exons
f-1
sp|A5CB46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_027347#unknown#0F0P0C
AT3G54190.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:20061759-20063880 REVERSE LENGTH=467
Repeat List (scaffold4719)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42156.1	1	473	507	81.06	473	87	0
Target_name	Start	End	Length	Cov(%)
sp\|A5CB46_VITVI	1	469	481	97.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42156.1	1	473	507	74.35	473	80	0
Target_name	Start	End	Length	Cov(%)
AT3G54190.1	1	455	467	97.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4719	Augustus	mRNA	3511	8825	.	-	.	ID=Dca42156.1;Parent=Dca42156
scaffold4719	Augustus	exon	3511	3614	.	-	.	ID=Dca42156.1.exon1;Parent=Dca42156.1
scaffold4719	Augustus	exon	3903	4151	.	-	.	ID=Dca42156.1.exon2;Parent=Dca42156.1
scaffold4719	Augustus	exon	4506	4776	.	-	.	ID=Dca42156.1.exon3;Parent=Dca42156.1
scaffold4719	Augustus	exon	4881	5073	.	-	.	ID=Dca42156.1.exon4;Parent=Dca42156.1
scaffold4719	Augustus	exon	6039	6119	.	-	.	ID=Dca42156.1.exon5;Parent=Dca42156.1
scaffold4719	Augustus	exon	6227	6352	.	-	.	ID=Dca42156.1.exon6;Parent=Dca42156.1
scaffold4719	Augustus	exon	6553	6703	.	-	.	ID=Dca42156.1.exon7;Parent=Dca42156.1
scaffold4719	Augustus	exon	6796	6943	.	-	.	ID=Dca42156.1.exon8;Parent=Dca42156.1
scaffold4719	Augustus	exon	8625	8825	.	-	.	ID=Dca42156.1.exon9;Parent=Dca42156.1