Carnation DB

Dca42161.1

Annotation

8-exons
f-1
sp|B9NA48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_674641#GO:0016021#0F0P1C
AT4G19645.1 | Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr4:10689941-10691298 REVERSE LENGTH=268
Repeat List (scaffold472)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42161.1	1	274	275	69.81	274	71	3e-114
Target_name	Start	End	Length	Cov(%)
sp\|B9NA48_POPTR	1	274	275	99.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42161.1	9	275	275	65.81	267	68	2e-110
Target_name	Start	End	Length	Cov(%)
AT4G19645.1	1	268	268	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold472	Augustus	mRNA	8540	11238	.	+	.	ID=Dca42161.1;Parent=Dca42161
scaffold472	Augustus	exon	8540	8677	.	+	.	ID=Dca42161.1.exon1;Parent=Dca42161.1
scaffold472	Augustus	exon	9127	9215	.	+	.	ID=Dca42161.1.exon2;Parent=Dca42161.1
scaffold472	Augustus	exon	9319	9457	.	+	.	ID=Dca42161.1.exon3;Parent=Dca42161.1
scaffold472	Augustus	exon	9856	9930	.	+	.	ID=Dca42161.1.exon4;Parent=Dca42161.1
scaffold472	Augustus	exon	10276	10397	.	+	.	ID=Dca42161.1.exon5;Parent=Dca42161.1
scaffold472	Augustus	exon	10480	10555	.	+	.	ID=Dca42161.1.exon6;Parent=Dca42161.1
scaffold472	Augustus	exon	10643	10702	.	+	.	ID=Dca42161.1.exon7;Parent=Dca42161.1
scaffold472	Augustus	exon	11110	11238	.	+	.	ID=Dca42161.1.exon8;Parent=Dca42161.1