Carnation DB

Dca42221.1

Annotation

7-exons
f-1
sp|B9HKH1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721099#GO:0008270#1F0P0C
AT4G14365.1 | Symbols: XBAT34 | XB3 ortholog 4 in Arabidopsis thaliana | chr4:8271660-8273685 REVERSE LENGTH=376
Repeat List (scaffold473)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42221.1	1	328	328	53.35	328	40	4e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9HKH1_POPTR	1	442	442	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42221.1	1	328	328	45.12	328	38	2e-55
Target_name	Start	End	Length	Cov(%)
AT4G14365.1	1	376	376	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold473	Augustus	mRNA	105754	109298	.	-	.	ID=Dca42221.1;Parent=Dca42221
scaffold473	Augustus	exon	105754	106227	.	-	.	ID=Dca42221.1.exon1;Parent=Dca42221.1
scaffold473	Augustus	exon	106420	106442	.	-	.	ID=Dca42221.1.exon2;Parent=Dca42221.1
scaffold473	Augustus	exon	106608	106710	.	-	.	ID=Dca42221.1.exon3;Parent=Dca42221.1
scaffold473	Augustus	exon	107347	107435	.	-	.	ID=Dca42221.1.exon4;Parent=Dca42221.1
scaffold473	Augustus	exon	107659	107739	.	-	.	ID=Dca42221.1.exon5;Parent=Dca42221.1
scaffold473	Augustus	exon	107975	108089	.	-	.	ID=Dca42221.1.exon6;Parent=Dca42221.1
scaffold473	Augustus	exon	109197	109298	.	-	.	ID=Dca42221.1.exon7;Parent=Dca42221.1