Carnation DB

Dca42232.1

Annotation

5-exons
f-1
sp|Q9S9A8_HORVU#BARE-1 polyprotein#Hordeum vulgare (Barley)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold4731)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42232.1	79	192	192	18.75	114	32	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|Q9S9A8_HORVU	15	129	1296	8.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42232.1	1	33	192	9.89	33	58	7e-06
Target_name	Start	End	Length	Cov(%)
Os03t0586500-01	191	223	272	12.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4731	Augustus	mRNA	30829	33257	.	+	.	ID=Dca42232.1;Parent=Dca42232
scaffold4731	Augustus	exon	30829	30846	.	+	.	ID=Dca42232.1.exon1;Parent=Dca42232.1
scaffold4731	Augustus	exon	30946	31022	.	+	.	ID=Dca42232.1.exon2;Parent=Dca42232.1
scaffold4731	Augustus	exon	31798	31873	.	+	.	ID=Dca42232.1.exon3;Parent=Dca42232.1
scaffold4731	Augustus	exon	31989	32047	.	+	.	ID=Dca42232.1.exon4;Parent=Dca42232.1
scaffold4731	Augustus	exon	32909	33257	.	+	.	ID=Dca42232.1.exon5;Parent=Dca42232.1