Carnation DB

Dca42256.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold4738)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42256.1	10	381	794	19.64	372	42	4e-92
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	391	763	1110	33.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42256.1	49	379	794	14.23	331	34	8e-49
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	341	674	857	38.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4738	Augustus	mRNA	7588	13129	.	-	.	ID=Dca42256.1;Parent=Dca42256
scaffold4738	Augustus	exon	7588	7776	.	-	.	ID=Dca42256.1.exon1;Parent=Dca42256.1
scaffold4738	Augustus	exon	7852	8469	.	-	.	ID=Dca42256.1.exon2;Parent=Dca42256.1
scaffold4738	Augustus	exon	8547	8941	.	-	.	ID=Dca42256.1.exon3;Parent=Dca42256.1
scaffold4738	Augustus	exon	10754	10793	.	-	.	ID=Dca42256.1.exon4;Parent=Dca42256.1
scaffold4738	Augustus	exon	11987	13129	.	-	.	ID=Dca42256.1.exon5;Parent=Dca42256.1