Dca42258.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4738)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42258.1 |
173 |
1219 |
1219 |
44.13 |
1047 |
49 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
9 |
1089 |
1501 |
72.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42258.1 |
511 |
1206 |
1219 |
20.09 |
696 |
35 |
2e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
413 |
1073 |
1539 |
42.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4738 |
Augustus |
mRNA |
25954 |
30016 |
. |
+ |
. |
ID=Dca42258.1;Parent=Dca42258 |
| scaffold4738 |
Augustus |
exon |
25954 |
26433 |
. |
+ |
. |
ID=Dca42258.1.exon1;Parent=Dca42258.1 |
| scaffold4738 |
Augustus |
exon |
26784 |
28978 |
. |
+ |
. |
ID=Dca42258.1.exon2;Parent=Dca42258.1 |
| scaffold4738 |
Augustus |
exon |
29032 |
30016 |
. |
+ |
. |
ID=Dca42258.1.exon3;Parent=Dca42258.1 |
