Carnation DB

Dca42301.1

Annotation

7-exons
f-1
sp|D7UDH2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0122g00410#unknown#0F0P0C
AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:7314338-7319246 FORWARD LENGTH=1364
Repeat List (scaffold4745)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42301.1	762	1294	1331	16.82	533	42	7e-97
Target_name	Start	End	Length	Cov(%)
sp\|D7UDH2_VITVI	905	1440	1477	36.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42301.1	695	1316	1331	17.12	622	35	5e-71
Target_name	Start	End	Length	Cov(%)
AT1G20970.1	714	1351	1364	46.77

seqname	source	feature	start	end	score	strand	frame	group
scaffold4745	Augustus	mRNA	10002	14882	.	+	.	ID=Dca42301.1;Parent=Dca42301
scaffold4745	Augustus	exon	10002	12413	.	+	.	ID=Dca42301.1.exon1;Parent=Dca42301.1
scaffold4745	Augustus	exon	12500	12658	.	+	.	ID=Dca42301.1.exon2;Parent=Dca42301.1
scaffold4745	Augustus	exon	12759	12938	.	+	.	ID=Dca42301.1.exon3;Parent=Dca42301.1
scaffold4745	Augustus	exon	13044	13238	.	+	.	ID=Dca42301.1.exon4;Parent=Dca42301.1
scaffold4745	Augustus	exon	13502	13591	.	+	.	ID=Dca42301.1.exon5;Parent=Dca42301.1
scaffold4745	Augustus	exon	13693	14304	.	+	.	ID=Dca42301.1.exon6;Parent=Dca42301.1
scaffold4745	Augustus	exon	14535	14882	.	+	.	ID=Dca42301.1.exon7;Parent=Dca42301.1