Carnation DB

Dca42311.1

Annotation

5-exons
f-1
sp|B9N5N8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828145#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
sp|B9T1P9_RICCO#Kinesin heavy chain, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0104410#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
Repeat List (scaffold475)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42311.1	18	67	232	16.81	50	70	1e-14
Target_name	Start	End	Length	Cov(%)
sp\|B9N5N8_POPTR	108	163	1129	4.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42311.1	14	67	232	15.94	54	61	2e-12
Target_name	Start	End	Length	Cov(%)
AT3G44730.1	43	103	1087	5.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold475	Augustus	mRNA	10980	12685	.	+	.	ID=Dca42311.1;Parent=Dca42311
scaffold475	Augustus	exon	10980	11018	.	+	.	ID=Dca42311.1.exon1;Parent=Dca42311.1
scaffold475	Augustus	exon	11106	11249	.	+	.	ID=Dca42311.1.exon2;Parent=Dca42311.1
scaffold475	Augustus	exon	11918	11986	.	+	.	ID=Dca42311.1.exon3;Parent=Dca42311.1
scaffold475	Augustus	exon	12112	12336	.	+	.	ID=Dca42311.1.exon4;Parent=Dca42311.1
scaffold475	Augustus	exon	12464	12685	.	+	.	ID=Dca42311.1.exon5;Parent=Dca42311.1