Dca42315.1
Annotation
- 3-exons
- f-1
- sp|Q2R0R0_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g41730#unknown#0F0P0C
- Repeat List (scaffold475)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42315.1 |
2 |
120 |
256 |
25.78 |
119 |
55 |
4e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R0R0_ORYSJ |
384 |
504 |
1086 |
11.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42315.1 |
2 |
159 |
256 |
21.87 |
158 |
36 |
7e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
396 |
536 |
829 |
17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold475 |
Augustus |
mRNA |
35939 |
39041 |
. |
- |
. |
ID=Dca42315.1;Parent=Dca42315 |
| scaffold475 |
Augustus |
exon |
35939 |
36108 |
. |
- |
. |
ID=Dca42315.1.exon1;Parent=Dca42315.1 |
| scaffold475 |
Augustus |
exon |
36291 |
36413 |
. |
- |
. |
ID=Dca42315.1.exon2;Parent=Dca42315.1 |
| scaffold475 |
Augustus |
exon |
38564 |
39041 |
. |
- |
. |
ID=Dca42315.1.exon3;Parent=Dca42315.1 |
