Dca42379.1
Annotation
- 4-exons
- f-1
- sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold4760)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42379.1 |
67 |
172 |
596 |
8.72 |
106 |
39 |
5e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AUE6_VITVI |
1 |
135 |
2026 |
6.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42379.1 |
229 |
596 |
596 |
23.32 |
368 |
38 |
6e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
39 |
399 |
1262 |
28.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4760 |
Augustus |
mRNA |
3661 |
7225 |
. |
+ |
. |
ID=Dca42379.1;Parent=Dca42379 |
| scaffold4760 |
Augustus |
exon |
3661 |
3927 |
. |
+ |
. |
ID=Dca42379.1.exon1;Parent=Dca42379.1 |
| scaffold4760 |
Augustus |
exon |
4019 |
4442 |
. |
+ |
. |
ID=Dca42379.1.exon2;Parent=Dca42379.1 |
| scaffold4760 |
Augustus |
exon |
4614 |
4716 |
. |
+ |
. |
ID=Dca42379.1.exon3;Parent=Dca42379.1 |
| scaffold4760 |
Augustus |
exon |
6229 |
7225 |
. |
+ |
. |
ID=Dca42379.1.exon4;Parent=Dca42379.1 |
