Carnation DB

Dca42399.1

Annotation

5-exons
f-1
sp|D7L724_ARALL#Rho GDP-dissociation inhibitor family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_896959#GO:0005737;GO:0005094#1F0P1C
Repeat List (scaffold4765)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42399.1	2	201	202	71.28	200	72	2e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7L724_ARALL	40	239	241	82.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42399.1	2	201	202	69.8	200	71	1e-84
Target_name	Start	End	Length	Cov(%)
AT3G07880.1	39	238	240	83.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4765	Augustus	mRNA	18694	21457	.	+	.	ID=Dca42399.1;Parent=Dca42399
scaffold4765	Augustus	exon	18694	18816	.	+	.	ID=Dca42399.1.exon1;Parent=Dca42399.1
scaffold4765	Augustus	exon	19136	19202	.	+	.	ID=Dca42399.1.exon2;Parent=Dca42399.1
scaffold4765	Augustus	exon	19642	19860	.	+	.	ID=Dca42399.1.exon3;Parent=Dca42399.1
scaffold4765	Augustus	exon	20208	20332	.	+	.	ID=Dca42399.1.exon4;Parent=Dca42399.1
scaffold4765	Augustus	exon	21383	21457	.	+	.	ID=Dca42399.1.exon5;Parent=Dca42399.1