Carnation DB

Dca42438.1

Annotation

8-exons
f-1
sp|B9SRY1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0517130#unknown#0F0P0C
AT5G03900.2 | Symbols: | Iron-sulphur cluster biosynthesis family protein | chr5:1048338-1051869 FORWARD LENGTH=523
Repeat List (scaffold4770)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42438.1	9	333	343	59.18	325	62	1e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9SRY1_RICCO	3	324	514	62.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42438.1	9	330	343	55.39	322	57	4e-99
Target_name	Start	End	Length	Cov(%)
AT5G03900.2	3	332	523	63.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4770	Augustus	mRNA	18870	23107	.	+	.	ID=Dca42438.1;Parent=Dca42438
scaffold4770	Augustus	exon	18870	19271	.	+	.	ID=Dca42438.1.exon1;Parent=Dca42438.1
scaffold4770	Augustus	exon	19657	19764	.	+	.	ID=Dca42438.1.exon2;Parent=Dca42438.1
scaffold4770	Augustus	exon	19840	19943	.	+	.	ID=Dca42438.1.exon3;Parent=Dca42438.1
scaffold4770	Augustus	exon	20029	20115	.	+	.	ID=Dca42438.1.exon4;Parent=Dca42438.1
scaffold4770	Augustus	exon	20971	21043	.	+	.	ID=Dca42438.1.exon5;Parent=Dca42438.1
scaffold4770	Augustus	exon	21156	21221	.	+	.	ID=Dca42438.1.exon6;Parent=Dca42438.1
scaffold4770	Augustus	exon	22248	22331	.	+	.	ID=Dca42438.1.exon7;Parent=Dca42438.1
scaffold4770	Augustus	exon	23000	23107	.	+	.	ID=Dca42438.1.exon8;Parent=Dca42438.1