Carnation DB

Dca42456.1

Annotation

6-exons
f-1
sp|B9RI87_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1577220#unknown#0F0P0C
Os09t0488600-00 Protein kinase PKN/PRK1, effector domain containing protein.
Repeat List (scaffold4775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42456.1	1	465	465	47.31	465	45	2e-92
Target_name	Start	End	Length	Cov(%)
sp\|B9RI87_RICCO	1	490	490	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42456.1	29	356	465	33.97	328	48	7e-77
Target_name	Start	End	Length	Cov(%)
AT5G12930.1	31	343	439	71.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4775	Augustus	mRNA	15429	17712	.	+	.	ID=Dca42456.1;Parent=Dca42456
scaffold4775	Augustus	exon	15429	15788	.	+	.	ID=Dca42456.1.exon1;Parent=Dca42456.1
scaffold4775	Augustus	exon	16163	16375	.	+	.	ID=Dca42456.1.exon2;Parent=Dca42456.1
scaffold4775	Augustus	exon	16499	16645	.	+	.	ID=Dca42456.1.exon3;Parent=Dca42456.1
scaffold4775	Augustus	exon	16737	16856	.	+	.	ID=Dca42456.1.exon4;Parent=Dca42456.1
scaffold4775	Augustus	exon	16974	17060	.	+	.	ID=Dca42456.1.exon5;Parent=Dca42456.1
scaffold4775	Augustus	exon	17242	17712	.	+	.	ID=Dca42456.1.exon6;Parent=Dca42456.1