Dca42470.1
Annotation
- 2-exons
- f-1
- sp|Q9LVQ2_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4777)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42470.1 |
1 |
321 |
321 |
34.57 |
321 |
32 |
6e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ2_ARATH |
56 |
399 |
1491 |
23.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42470.1 |
1 |
148 |
321 |
15.57 |
148 |
34 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
49 |
196 |
237 |
62.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4777 |
Augustus |
mRNA |
538 |
1567 |
. |
- |
. |
ID=Dca42470.1;Parent=Dca42470 |
| scaffold4777 |
Augustus |
exon |
538 |
1032 |
. |
- |
. |
ID=Dca42470.1.exon1;Parent=Dca42470.1 |
| scaffold4777 |
Augustus |
exon |
1097 |
1567 |
. |
- |
. |
ID=Dca42470.1.exon2;Parent=Dca42470.1 |
