Carnation DB

Dca4248.1

Annotation

8-exons
f-1
sp|D7SMJ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0083g00540#GO:0005622;GO:0005097#1F0P1C
sp|B9SIY8_RICCO#Ecotropic viral integration site, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0596820#GO:0005622;GO:0005097#1F0P1C
Repeat List (scaffold11578)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4248.1	1	357	440	67.95	357	84	2e-179
Target_name	Start	End	Length	Cov(%)
sp\|D7SMJ1_VITVI	1	358	358	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4248.1	3	348	440	64.09	346	81	9e-169
Target_name	Start	End	Length	Cov(%)
AT3G02460.1	4	352	353	98.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11578	Augustus	mRNA	4336	7174	.	+	.	ID=Dca4248.1;Parent=Dca4248
scaffold11578	Augustus	exon	4336	4475	.	+	.	ID=Dca4248.1.exon1;Parent=Dca4248.1
scaffold11578	Augustus	exon	4940	5135	.	+	.	ID=Dca4248.1.exon2;Parent=Dca4248.1
scaffold11578	Augustus	exon	5395	5565	.	+	.	ID=Dca4248.1.exon3;Parent=Dca4248.1
scaffold11578	Augustus	exon	5651	5767	.	+	.	ID=Dca4248.1.exon4;Parent=Dca4248.1
scaffold11578	Augustus	exon	6043	6240	.	+	.	ID=Dca4248.1.exon5;Parent=Dca4248.1
scaffold11578	Augustus	exon	6336	6395	.	+	.	ID=Dca4248.1.exon6;Parent=Dca4248.1
scaffold11578	Augustus	exon	6483	6581	.	+	.	ID=Dca4248.1.exon7;Parent=Dca4248.1
scaffold11578	Augustus	exon	6833	7174	.	+	.	ID=Dca4248.1.exon8;Parent=Dca4248.1