Carnation DB

Dca42489.1

Annotation

5-exons
f-1
sp|F6H958_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0034g01430#unknown#0F0P0C
AT1G10780.1 | Symbols: | F-box/RNI-like superfamily protein | chr1:3592875-3594310 REVERSE LENGTH=418
Repeat List (scaffold478)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42489.1	1	387	542	48.33	387	68	6e-153
Target_name	Start	End	Length	Cov(%)
sp\|F6H958_VITVI	1	387	422	91.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42489.1	1	387	542	42.43	387	60	4e-133
Target_name	Start	End	Length	Cov(%)
AT1G10780.1	1	383	418	91.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold478	Augustus	mRNA	42913	48588	.	-	.	ID=Dca42489.1;Parent=Dca42489
scaffold478	Augustus	exon	42913	43217	.	-	.	ID=Dca42489.1.exon1;Parent=Dca42489.1
scaffold478	Augustus	exon	44813	44975	.	-	.	ID=Dca42489.1.exon2;Parent=Dca42489.1
scaffold478	Augustus	exon	47206	47334	.	-	.	ID=Dca42489.1.exon3;Parent=Dca42489.1
scaffold478	Augustus	exon	47451	47731	.	-	.	ID=Dca42489.1.exon4;Parent=Dca42489.1
scaffold478	Augustus	exon	47838	48588	.	-	.	ID=Dca42489.1.exon5;Parent=Dca42489.1