Carnation DB

Dca42498.1

Annotation

9-exons
f-1
sp|D7KWF3_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_475997#GO:0016021;GO:0005524;GO:0015662;GO:0000287;GO:0004012;GO:0006812#4F1P1C
AT1G68710.1 | Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:25793498-25797975 REVERSE LENGTH=1200
Repeat List (scaffold478)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42498.1	1	575	654	64.52	575	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7KWF3_ARALL	604	1191	1200	49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42498.1	1	575	654	64.22	575	72	0
Target_name	Start	End	Length	Cov(%)
AT1G68710.1	606	1191	1200	48.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold478	Augustus	mRNA	112462	115316	.	-	.	ID=Dca42498.1;Parent=Dca42498
scaffold478	Augustus	exon	112462	113301	.	-	.	ID=Dca42498.1.exon1;Parent=Dca42498.1
scaffold478	Augustus	exon	113380	113571	.	-	.	ID=Dca42498.1.exon2;Parent=Dca42498.1
scaffold478	Augustus	exon	113724	113783	.	-	.	ID=Dca42498.1.exon3;Parent=Dca42498.1
scaffold478	Augustus	exon	113858	113983	.	-	.	ID=Dca42498.1.exon4;Parent=Dca42498.1
scaffold478	Augustus	exon	114079	114288	.	-	.	ID=Dca42498.1.exon5;Parent=Dca42498.1
scaffold478	Augustus	exon	114373	114481	.	-	.	ID=Dca42498.1.exon6;Parent=Dca42498.1
scaffold478	Augustus	exon	114573	114661	.	-	.	ID=Dca42498.1.exon7;Parent=Dca42498.1
scaffold478	Augustus	exon	114890	115166	.	-	.	ID=Dca42498.1.exon8;Parent=Dca42498.1
scaffold478	Augustus	exon	115255	115316	.	-	.	ID=Dca42498.1.exon9;Parent=Dca42498.1