Carnation DB

Dca425.1

Annotation

8-exons
f-1
sp|B9S4F6_RICCO#Glycerol-3-phosphate dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0689940#GO:0009331;GO:0047952;GO:0004367;GO:0051287;GO:0046168#3F1P1C
Repeat List (scaffold1006)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca425.1	87	474	474	62.65	388	76	7e-166
Target_name	Start	End	Length	Cov(%)
sp\|B9S4F6_RICCO	35	410	410	91.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca425.1	100	474	474	60.54	375	76	1e-160
Target_name	Start	End	Length	Cov(%)
AT2G40690.1	55	420	420	87.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1006	Augus-PASA	mRNA	46222	50642	.	-	.	ID=Dca425.1;Parent=Dca425
scaffold1006	Augus-PASA	exon	46222	46236	.	-	.	ID=Dca425.1.exon1;Parent=Dca425.1
scaffold1006	Augustus	exon	46662	46811	.	-	.	ID=Dca425.1.exon2;Parent=Dca425.1
scaffold1006	Augustus	exon	46885	47034	.	-	.	ID=Dca425.1.exon3;Parent=Dca425.1
scaffold1006	Augustus	exon	47482	47744	.	-	.	ID=Dca425.1.exon4;Parent=Dca425.1
scaffold1006	Augustus	exon	48146	48347	.	-	.	ID=Dca425.1.exon5;Parent=Dca425.1
scaffold1006	Augustus	exon	48802	48907	.	-	.	ID=Dca425.1.exon6;Parent=Dca425.1
scaffold1006	Augustus	exon	49007	49143	.	-	.	ID=Dca425.1.exon7;Parent=Dca425.1
scaffold1006	Augustus	exon	50241	50642	.	-	.	ID=Dca425.1.exon8;Parent=Dca425.1