Carnation DB

Dca42800.1

Annotation

7-exons
f-1
sp|B8AJV1_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_13484#GO:0003723;GO:0003964;GO:0006278#2F1P0C
AT5G58760.1 | Symbols: DDB2 | damaged DNA binding 2 | chr5:23730741-23733606 REVERSE LENGTH=557
Repeat List (scaffold4829)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42800.1	11	992	1197	27.9	982	34	1e-145
Target_name	Start	End	Length	Cov(%)
sp\|B8AJV1_ORYSI	240	1237	1874	53.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42800.1	998	1193	1197	11.36	196	61	2e-71
Target_name	Start	End	Length	Cov(%)
AT5G58760.1	245	467	557	40.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4829	Augustus	mRNA	28820	35863	.	-	.	ID=Dca42800.1;Parent=Dca42800
scaffold4829	Augustus	exon	28820	28978	.	-	.	ID=Dca42800.1.exon1;Parent=Dca42800.1
scaffold4829	Augustus	exon	29073	29320	.	-	.	ID=Dca42800.1.exon2;Parent=Dca42800.1
scaffold4829	Augustus	exon	29538	29679	.	-	.	ID=Dca42800.1.exon3;Parent=Dca42800.1
scaffold4829	Augustus	exon	29823	29872	.	-	.	ID=Dca42800.1.exon4;Parent=Dca42800.1
scaffold4829	Augustus	exon	32588	34650	.	-	.	ID=Dca42800.1.exon5;Parent=Dca42800.1
scaffold4829	Augustus	exon	34882	35795	.	-	.	ID=Dca42800.1.exon6;Parent=Dca42800.1
scaffold4829	Augustus	exon	35846	35863	.	-	.	ID=Dca42800.1.exon7;Parent=Dca42800.1