Dca42853.1
Annotation
- 4-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold484)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42853.1 |
439 |
533 |
648 |
5.86 |
95 |
35 |
8e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
549 |
657 |
1296 |
8.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42853.1 |
331 |
493 |
648 |
7.87 |
163 |
32 |
5e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
267 |
423 |
573 |
27.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold484 |
Augustus |
mRNA |
2904 |
6949 |
. |
- |
. |
ID=Dca42853.1;Parent=Dca42853 |
| scaffold484 |
Augustus |
exon |
2904 |
3250 |
. |
- |
. |
ID=Dca42853.1.exon1;Parent=Dca42853.1 |
| scaffold484 |
Augustus |
exon |
3724 |
3838 |
. |
- |
. |
ID=Dca42853.1.exon2;Parent=Dca42853.1 |
| scaffold484 |
Augustus |
exon |
5348 |
6730 |
. |
- |
. |
ID=Dca42853.1.exon3;Parent=Dca42853.1 |
| scaffold484 |
Augustus |
exon |
6848 |
6949 |
. |
- |
. |
ID=Dca42853.1.exon4;Parent=Dca42853.1 |
