Carnation DB

Dca42948.1

Annotation

13-exons
f-1
sp|B9GV00_POPTR#Queuine tRNA-ribosyltransferase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_411694#GO:0008479;GO:0008616#1F1P0C
Repeat List (scaffold486)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42948.1	15	367	369	85.09	353	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GV00_POPTR	6	392	392	98.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42948.1	15	367	369	81.02	353	78	2e-175
Target_name	Start	End	Length	Cov(%)
Os09t0469900-01	6	392	418	92.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold486	Augustus	mRNA	48815	51323	.	+	.	ID=Dca42948.1;Parent=Dca42948
scaffold486	Augustus	exon	48815	48953	.	+	.	ID=Dca42948.1.exon1;Parent=Dca42948.1
scaffold486	Augustus	exon	49041	49219	.	+	.	ID=Dca42948.1.exon2;Parent=Dca42948.1
scaffold486	Augustus	exon	49316	49366	.	+	.	ID=Dca42948.1.exon3;Parent=Dca42948.1
scaffold486	Augustus	exon	49443	49499	.	+	.	ID=Dca42948.1.exon4;Parent=Dca42948.1
scaffold486	Augustus	exon	49585	49705	.	+	.	ID=Dca42948.1.exon5;Parent=Dca42948.1
scaffold486	Augustus	exon	49870	49936	.	+	.	ID=Dca42948.1.exon6;Parent=Dca42948.1
scaffold486	Augustus	exon	50029	50070	.	+	.	ID=Dca42948.1.exon7;Parent=Dca42948.1
scaffold486	Augustus	exon	50161	50266	.	+	.	ID=Dca42948.1.exon8;Parent=Dca42948.1
scaffold486	Augustus	exon	50357	50467	.	+	.	ID=Dca42948.1.exon9;Parent=Dca42948.1
scaffold486	Augustus	exon	50553	50624	.	+	.	ID=Dca42948.1.exon10;Parent=Dca42948.1
scaffold486	Augustus	exon	50947	50993	.	+	.	ID=Dca42948.1.exon11;Parent=Dca42948.1
scaffold486	Augustus	exon	51098	51125	.	+	.	ID=Dca42948.1.exon12;Parent=Dca42948.1
scaffold486	Augustus	exon	51234	51323	.	+	.	ID=Dca42948.1.exon13;Parent=Dca42948.1