Carnation DB

Dca43015.1

Annotation

8-exons
f-1
sp|D7T1F5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g01890#GO:0005622;GO:0004527;GO:0003676#2F0P1C
sp|G7K7Q6_MEDTR#Oligoribonuclease#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g088330#GO:0005622;GO:0043169;GO:0003677;GO:0004527;GO:0004553;GO:0046983;GO:0005975#5F1P1C
Repeat List (scaffold487)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43015.1	1	239	245	66.53	239	69	7e-88
Target_name	Start	End	Length	Cov(%)
sp\|D7T1F5_VITVI	1	238	245	97.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43015.1	1	239	245	57.55	239	59	3e-77
Target_name	Start	End	Length	Cov(%)
AT2G26970.1	1	218	222	98.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold487	Augustus	mRNA	104696	110975	.	+	.	ID=Dca43015.1;Parent=Dca43015
scaffold487	Augustus	exon	104696	104783	.	+	.	ID=Dca43015.1.exon1;Parent=Dca43015.1
scaffold487	Augustus	exon	107212	107346	.	+	.	ID=Dca43015.1.exon2;Parent=Dca43015.1
scaffold487	Augustus	exon	107732	107808	.	+	.	ID=Dca43015.1.exon3;Parent=Dca43015.1
scaffold487	Augustus	exon	109275	109356	.	+	.	ID=Dca43015.1.exon4;Parent=Dca43015.1
scaffold487	Augustus	exon	109516	109571	.	+	.	ID=Dca43015.1.exon5;Parent=Dca43015.1
scaffold487	Augustus	exon	110079	110168	.	+	.	ID=Dca43015.1.exon6;Parent=Dca43015.1
scaffold487	Augustus	exon	110662	110752	.	+	.	ID=Dca43015.1.exon7;Parent=Dca43015.1
scaffold487	Augustus	exon	110857	110975	.	+	.	ID=Dca43015.1.exon8;Parent=Dca43015.1