Carnation DB

Dca4303.1

Annotation

9-exons
f-1
sp|F6GVD5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0021g00980#GO:0005488;GO:0016070#1F1P0C
AT3G60240.4 | Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1727
Repeat List (scaffold116)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4303.1	1	573	1783	12.61	573	37	6e-60
Target_name	Start	End	Length	Cov(%)
sp\|F6GVD5_VITVI	1	545	1712	31.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4303.1	1	515	1783	10.31	515	33	3e-38
Target_name	Start	End	Length	Cov(%)
AT3G60240.4	1	529	1727	30.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold116	Augustus	mRNA	44076	51844	.	+	.	ID=Dca4303.1;Parent=Dca4303
scaffold116	Augustus	exon	44076	44239	.	+	.	ID=Dca4303.1.exon1;Parent=Dca4303.1
scaffold116	Augustus	exon	44549	44685	.	+	.	ID=Dca4303.1.exon2;Parent=Dca4303.1
scaffold116	Augustus	exon	44811	44957	.	+	.	ID=Dca4303.1.exon3;Parent=Dca4303.1
scaffold116	Augustus	exon	45305	45363	.	+	.	ID=Dca4303.1.exon4;Parent=Dca4303.1
scaffold116	Augustus	exon	45454	45510	.	+	.	ID=Dca4303.1.exon5;Parent=Dca4303.1
scaffold116	Augustus	exon	46094	47266	.	+	.	ID=Dca4303.1.exon6;Parent=Dca4303.1
scaffold116	Augustus	exon	47546	50634	.	+	.	ID=Dca4303.1.exon7;Parent=Dca4303.1
scaffold116	Augus-PASA	exon	51234	51428	.	+	.	ID=Dca4303.1.exon8;Parent=Dca4303.1
scaffold116	Augus-PASA	exon	51514	51844	.	+	.	ID=Dca4303.1.exon9;Parent=Dca4303.1