Dca43088.1
Annotation
- 4-exons
- f-1
- sp|F6I0Q2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g04040#GO:0004046;GO:0008237;GO:0006520;GO:0006508#2F2P0C
- AT4G38220.2 | Symbols: | Peptidase M20/M25/M40 family protein | chr4:17925251-17926919 FORWARD LENGTH=433
- Repeat List (scaffold4886)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43088.1 |
11 |
406 |
412 |
66.01 |
396 |
69 |
7e-166
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I0Q2_VITVI |
46 |
441 |
478 |
82.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43088.1 |
20 |
406 |
412 |
62.13 |
387 |
66 |
1e-151
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G38220.2 |
16 |
399 |
433 |
88.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4886 |
Augustus |
mRNA |
1729 |
3662 |
. |
+ |
. |
ID=Dca43088.1;Parent=Dca43088 |
| scaffold4886 |
Augustus |
exon |
1729 |
2112 |
. |
+ |
. |
ID=Dca43088.1.exon1;Parent=Dca43088.1 |
| scaffold4886 |
Augustus |
exon |
2637 |
3092 |
. |
+ |
. |
ID=Dca43088.1.exon2;Parent=Dca43088.1 |
| scaffold4886 |
Augustus |
exon |
3191 |
3328 |
. |
+ |
. |
ID=Dca43088.1.exon3;Parent=Dca43088.1 |
| scaffold4886 |
Augustus |
exon |
3402 |
3662 |
. |
+ |
. |
ID=Dca43088.1.exon4;Parent=Dca43088.1 |
