Carnation DB

Dca43110.1

Annotation

6-exons
f-1
sp|F6GY50_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0072g00300#GO:0030272;GO:0005524;GO:0009396#2F1P0C
sp|B9SE88_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0959760#GO:0030272;GO:0005524;GO:0009396#2F1P0C
Repeat List (scaffold489)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43110.1	3	314	314	83.75	312	85	1e-153
Target_name	Start	End	Length	Cov(%)
sp\|F6GY50_VITVI	50	354	354	86.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43110.1	1	314	314	78.98	314	79	3e-143
Target_name	Start	End	Length	Cov(%)
AT1G76730.1	42	353	354	88.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold489	Augus-PASA	mRNA	125866	127753	.	+	.	ID=Dca43110.1;Parent=Dca43110
scaffold489	Augus-PASA	exon	125866	126141	.	+	.	ID=Dca43110.1.exon1;Parent=Dca43110.1
scaffold489	Augus-PASA	exon	126618	126708	.	+	.	ID=Dca43110.1.exon2;Parent=Dca43110.1
scaffold489	Augus-PASA	exon	126901	127127	.	+	.	ID=Dca43110.1.exon3;Parent=Dca43110.1
scaffold489	Augus-PASA	exon	127226	127301	.	+	.	ID=Dca43110.1.exon4;Parent=Dca43110.1
scaffold489	Augus-PASA	exon	127380	127505	.	+	.	ID=Dca43110.1.exon5;Parent=Dca43110.1
scaffold489	Augus-PASA	exon	127605	127753	.	+	.	ID=Dca43110.1.exon6;Parent=Dca43110.1