Carnation DB

Dca43113.1

Annotation

11-exons
f-1
sp|B9I791_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1097738#GO:0005622;GO:0005524;GO:0043140;GO:0003676;GO:0006310;GO:0006281;GO:0006260#3F3P1C
Os07t0681600-01 DNA helicase, ATP-dependent, RecQ type domain containing protein.
Repeat List (scaffold4890)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43113.1	3	525	525	56.57	523	57	9e-170
Target_name	Start	End	Length	Cov(%)
sp\|B9I791_POPTR	336	854	854	60.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43113.1	3	525	525	45.33	523	45	3e-125
Target_name	Start	End	Length	Cov(%)
Os07t0681600-01	370	886	887	58.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4890	Augustus	mRNA	7851	12996	.	-	.	ID=Dca43113.1;Parent=Dca43113
scaffold4890	Augustus	exon	7851	7976	.	-	.	ID=Dca43113.1.exon1;Parent=Dca43113.1
scaffold4890	Augustus	exon	8062	8397	.	-	.	ID=Dca43113.1.exon2;Parent=Dca43113.1
scaffold4890	Augustus	exon	8511	8720	.	-	.	ID=Dca43113.1.exon3;Parent=Dca43113.1
scaffold4890	Augustus	exon	9557	9769	.	-	.	ID=Dca43113.1.exon4;Parent=Dca43113.1
scaffold4890	Augustus	exon	9920	10013	.	-	.	ID=Dca43113.1.exon5;Parent=Dca43113.1
scaffold4890	Augustus	exon	10188	10258	.	-	.	ID=Dca43113.1.exon6;Parent=Dca43113.1
scaffold4890	Augustus	exon	10769	10937	.	-	.	ID=Dca43113.1.exon7;Parent=Dca43113.1
scaffold4890	Augustus	exon	11034	11076	.	-	.	ID=Dca43113.1.exon8;Parent=Dca43113.1
scaffold4890	Augustus	exon	11555	11663	.	-	.	ID=Dca43113.1.exon9;Parent=Dca43113.1
scaffold4890	Augustus	exon	12463	12599	.	-	.	ID=Dca43113.1.exon10;Parent=Dca43113.1
scaffold4890	Augustus	exon	12927	12996	.	-	.	ID=Dca43113.1.exon11;Parent=Dca43113.1