Carnation DB

Dca43152.1

Annotation

6-exons
f-1
sp|D7SWC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g02260#GO:0005525;GO:0007264#1F1P0C
sp|B0BLH9_LOTJA#CM0216.310.nc protein#Lotus japonicus#Name=CM0216.310.nc#GO:0005525;GO:0007264#1F1P0C
Repeat List (scaffold49)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43152.1	10	395	395	61.01	386	61	1e-133
Target_name	Start	End	Length	Cov(%)
sp\|D7SWC7_VITVI	6	402	403	98.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43152.1	10	388	395	52.4	379	52	2e-111
Target_name	Start	End	Length	Cov(%)
Os04t0584800-01	8	410	419	96.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold49	Augus-PASA	mRNA	34975	38195	.	+	.	ID=Dca43152.1;Parent=Dca43152
scaffold49	Augus-PASA	exon	34975	35068	.	+	.	ID=Dca43152.1.exon1;Parent=Dca43152.1
scaffold49	Augus-PASA	exon	36486	36546	.	+	.	ID=Dca43152.1.exon2;Parent=Dca43152.1
scaffold49	Augus-PASA	exon	36660	36795	.	+	.	ID=Dca43152.1.exon3;Parent=Dca43152.1
scaffold49	Augus-PASA	exon	37119	37449	.	+	.	ID=Dca43152.1.exon4;Parent=Dca43152.1
scaffold49	Augus-PASA	exon	37532	37660	.	+	.	ID=Dca43152.1.exon5;Parent=Dca43152.1
scaffold49	Augus-PASA	exon	37759	38195	.	+	.	ID=Dca43152.1.exon6;Parent=Dca43152.1