Carnation DB

Dca43174.1

Annotation

7-exons
f-1
sp|F6H7G3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0116g01000#unknown#0F0P0C
Os05t0150000-01 Proline synthetase co-transcribed bacterial homolog protein.
Repeat List (scaffold49)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43174.1	44	288	290	67.93	245	81	1e-114
Target_name	Start	End	Length	Cov(%)
sp\|F6H7G3_VITVI	19	262	264	92.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43174.1	59	287	290	64.82	229	83	5e-111
Target_name	Start	End	Length	Cov(%)
Os05t0150000-01	14	242	244	93.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold49	Augus-PASA	mRNA	237607	239501	.	+	.	ID=Dca43174.1;Parent=Dca43174
scaffold49	Augus-PASA	exon	237607	237963	.	+	.	ID=Dca43174.1.exon1;Parent=Dca43174.1
scaffold49	Augus-PASA	exon	238196	238262	.	+	.	ID=Dca43174.1.exon2;Parent=Dca43174.1
scaffold49	Augus-PASA	exon	238428	238474	.	+	.	ID=Dca43174.1.exon3;Parent=Dca43174.1
scaffold49	Augus-PASA	exon	238597	238684	.	+	.	ID=Dca43174.1.exon4;Parent=Dca43174.1
scaffold49	Augus-PASA	exon	238850	238983	.	+	.	ID=Dca43174.1.exon5;Parent=Dca43174.1
scaffold49	Augus-PASA	exon	239063	239161	.	+	.	ID=Dca43174.1.exon6;Parent=Dca43174.1
scaffold49	Augus-PASA	exon	239421	239501	.	+	.	ID=Dca43174.1.exon7;Parent=Dca43174.1