Carnation DB

Dca43213.1

Annotation

5-exons
f-1
sp|B9SME8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1073680#unknown#0F0P0C
Os06t0642900-01 Ubiquitin system component Cue domain containing protein.
Repeat List (scaffold490)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43213.1	1	270	270	60	270	57	1e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9SME8_RICCO	1	282	282	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43213.1	1	270	270	51.48	270	49	3e-61
Target_name	Start	End	Length	Cov(%)
Os06t0642900-01	1	275	276	99.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold490	Augus-PASA	mRNA	134517	137312	.	-	.	ID=Dca43213.1;Parent=Dca43213
scaffold490	Augus-PASA	exon	134517	134603	.	-	.	ID=Dca43213.1.exon1;Parent=Dca43213.1
scaffold490	Augus-PASA	exon	134796	134969	.	-	.	ID=Dca43213.1.exon2;Parent=Dca43213.1
scaffold490	Augus-PASA	exon	135415	135635	.	-	.	ID=Dca43213.1.exon3;Parent=Dca43213.1
scaffold490	Augus-PASA	exon	135720	135849	.	-	.	ID=Dca43213.1.exon4;Parent=Dca43213.1
scaffold490	Augus-PASA	exon	137112	137312	.	-	.	ID=Dca43213.1.exon5;Parent=Dca43213.1