Carnation DB

Dca43224.1

Annotation

9-exons
f-1
sp|F6HDH6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g01880#GO:0000166#1F0P0C
AT2G39080.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:16309981-16312475 REVERSE LENGTH=351
Repeat List (scaffold4903)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43224.1	37	358	358	63.12	322	70	5e-128
Target_name	Start	End	Length	Cov(%)
sp\|F6HDH6_VITVI	31	346	346	91.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43224.1	70	355	358	55.3	286	68	1e-115
Target_name	Start	End	Length	Cov(%)
AT2G39080.1	60	347	351	82.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4903	Augus-PASA	mRNA	18101	23959	.	+	.	ID=Dca43224.1;Parent=Dca43224
scaffold4903	Augus-PASA	exon	18101	18341	.	+	.	ID=Dca43224.1.exon1;Parent=Dca43224.1
scaffold4903	Augus-PASA	exon	19667	19761	.	+	.	ID=Dca43224.1.exon2;Parent=Dca43224.1
scaffold4903	Augus-PASA	exon	20579	20751	.	+	.	ID=Dca43224.1.exon3;Parent=Dca43224.1
scaffold4903	Augus-PASA	exon	21484	21577	.	+	.	ID=Dca43224.1.exon4;Parent=Dca43224.1
scaffold4903	Augustus	exon	22062	22194	.	+	.	ID=Dca43224.1.exon5;Parent=Dca43224.1
scaffold4903	Augustus	exon	22300	22382	.	+	.	ID=Dca43224.1.exon6;Parent=Dca43224.1
scaffold4903	Augus-PASA	exon	23378	23463	.	+	.	ID=Dca43224.1.exon7;Parent=Dca43224.1
scaffold4903	Augus-PASA	exon	23543	23607	.	+	.	ID=Dca43224.1.exon8;Parent=Dca43224.1
scaffold4903	Augus-PASA	exon	23853	23959	.	+	.	ID=Dca43224.1.exon9;Parent=Dca43224.1