Dca43260.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold491)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43260.1 |
37 |
1324 |
1333 |
61.29 |
1288 |
63 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
39 |
1332 |
1333 |
97.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43260.1 |
51 |
1321 |
1333 |
39.23 |
1271 |
38 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
52 |
1425 |
1428 |
96.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold491 |
Augustus |
mRNA |
131413 |
136164 |
. |
+ |
. |
ID=Dca43260.1;Parent=Dca43260 |
| scaffold491 |
Augustus |
exon |
131413 |
131533 |
. |
+ |
. |
ID=Dca43260.1.exon1;Parent=Dca43260.1 |
| scaffold491 |
Augustus |
exon |
132200 |
136055 |
. |
+ |
. |
ID=Dca43260.1.exon2;Parent=Dca43260.1 |
| scaffold491 |
Augustus |
exon |
136140 |
136164 |
. |
+ |
. |
ID=Dca43260.1.exon3;Parent=Dca43260.1 |
