Carnation DB

Dca43269.1

Annotation

18-exons
f-1711
sp|E0CVP1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0116g00970#GO:0005737;GO:0005524;GO:0004823;GO:0006429#2F1P1C
sp|B9RXG5_RICCO#Leucyl-tRNA synthetase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0903620#GO:0005737;GO:0005524;GO:0004823;GO:0006429#2F1P1C
Repeat List (scaffold4913)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43269.1	2	266	266	76.69	265	77	5e-123
Target_name	Start	End	Length	Cov(%)
sp\|E0CVP1_VITVI	707	971	971	27.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43269.1	1	266	266	73.3	266	74	1e-116
Target_name	Start	End	Length	Cov(%)
AT4G04350.1	708	973	973	27.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4913	Augustus	mRNA	3114	12895	.	-	.	ID=Dca43269.1;Parent=Dca43269
scaffold4913	Augustus	exon	3114	3356	.	-	.	ID=Dca43269.1.exon1;Parent=Dca43269.1
scaffold4913	Augustus	exon	3450	3581	.	-	.	ID=Dca43269.1.exon2;Parent=Dca43269.1
scaffold4913	Augustus	exon	3754	3831	.	-	.	ID=Dca43269.1.exon3;Parent=Dca43269.1
scaffold4913	Augustus	exon	4064	4241	.	-	.	ID=Dca43269.1.exon4;Parent=Dca43269.1
scaffold4913	Augustus	exon	4416	4588	.	-	.	ID=Dca43269.1.exon5;Parent=Dca43269.1
scaffold4913	Augustus	exon	4876	4980	.	-	.	ID=Dca43269.1.exon6;Parent=Dca43269.1
scaffold4913	Augustus	exon	5059	5136	.	-	.	ID=Dca43269.1.exon7;Parent=Dca43269.1
scaffold4913	Augustus	exon	5531	5612	.	-	.	ID=Dca43269.1.exon8;Parent=Dca43269.1
scaffold4913	Augustus	exon	6582	6661	.	-	.	ID=Dca43269.1.exon9;Parent=Dca43269.1
scaffold4913	Augustus	exon	6881	7075	.	-	.	ID=Dca43269.1.exon10;Parent=Dca43269.1
scaffold4913	Augustus	exon	7202	7466	.	-	.	ID=Dca43269.1.exon11;Parent=Dca43269.1
scaffold4913	Augustus	exon	7771	7925	.	-	.	ID=Dca43269.1.exon12;Parent=Dca43269.1
scaffold4913	Augustus	exon	8004	8070	.	-	.	ID=Dca43269.1.exon13;Parent=Dca43269.1
scaffold4913	Augustus	exon	8167	8390	.	-	.	ID=Dca43269.1.exon14;Parent=Dca43269.1
scaffold4913	Augustus	exon	8512	8736	.	-	.	ID=Dca43269.1.exon15;Parent=Dca43269.1
scaffold4913	Augustus	exon	9115	9251	.	-	.	ID=Dca43269.1.exon16;Parent=Dca43269.1
scaffold4913	Augustus	exon	10259	10310	.	-	.	ID=Dca43269.1.exon17;Parent=Dca43269.1
scaffold4913	Augustus	exon	12854	12895	.	-	.	ID=Dca43269.1.exon18;Parent=Dca43269.1