Dca43356.1
Annotation
- 3-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2HRL2_MEDTR#RNA-directed DNA polymerase (Reverse transcriptase)#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MtrDRAFT_AC158465g14v2#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold493)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43356.1 |
48 |
314 |
314 |
36.62 |
267 |
39 |
9e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
367 |
665 |
1110 |
26.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43356.1 |
39 |
314 |
314 |
31.21 |
276 |
33 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
277 |
576 |
857 |
35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold493 |
Augustus |
mRNA |
46419 |
47572 |
. |
+ |
. |
ID=Dca43356.1;Parent=Dca43356 |
| scaffold493 |
Augustus |
exon |
46419 |
46555 |
. |
+ |
. |
ID=Dca43356.1.exon1;Parent=Dca43356.1 |
| scaffold493 |
Augustus |
exon |
46673 |
46920 |
. |
+ |
. |
ID=Dca43356.1.exon2;Parent=Dca43356.1 |
| scaffold493 |
Augustus |
exon |
47013 |
47572 |
. |
+ |
. |
ID=Dca43356.1.exon3;Parent=Dca43356.1 |
