Carnation DB

Dca43394.1

Annotation

5-exons
f-1
sp|D7T352_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0064g00450#GO:0020037#1F0P0C
sp|G5DWN0_SILLA#Reduced lateral root formation protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0020037#1F0P0C
Repeat List (scaffold4939)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43394.1	6	209	215	65.11	204	64	9e-76
Target_name	Start	End	Length	Cov(%)
sp\|D7T352_VITVI	4	223	226	97.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43394.1	1	215	215	56.74	215	57	6e-64
Target_name	Start	End	Length	Cov(%)
AT5G09680.1	1	208	211	98.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4939	Augus-PASA	mRNA	1070	3365	.	-	.	ID=Dca43394.1;Parent=Dca43394
scaffold4939	Augus-PASA	exon	1070	1155	.	-	.	ID=Dca43394.1.exon1;Parent=Dca43394.1
scaffold4939	Augus-PASA	exon	1497	1547	.	-	.	ID=Dca43394.1.exon2;Parent=Dca43394.1
scaffold4939	Augus-PASA	exon	2212	2346	.	-	.	ID=Dca43394.1.exon3;Parent=Dca43394.1
scaffold4939	Augus-PASA	exon	2888	3224	.	-	.	ID=Dca43394.1.exon4;Parent=Dca43394.1
scaffold4939	Augustus	exon	3327	3365	.	-	.	ID=Dca43394.1.exon5;Parent=Dca43394.1