Carnation DB

Dca43398.1

Annotation

5-exons
f-1
sp|D7TQP5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01480#GO:0005524;GO:0017111#2F0P0C
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3:19723416-19726489 FORWARD LENGTH=815
Repeat List (scaffold494)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43398.1	4	211	275	68.72	208	91	5e-111
Target_name	Start	End	Length	Cov(%)
sp\|D7TQP5_VITVI	3	210	806	25.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43398.1	4	211	275	66.9	208	89	3e-110
Target_name	Start	End	Length	Cov(%)
AT3G53230.1	3	210	815	25.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold494	Augustus	mRNA	37822	45322	.	-	.	ID=Dca43398.1;Parent=Dca43398
scaffold494	Augustus	exon	37822	38034	.	-	.	ID=Dca43398.1.exon1;Parent=Dca43398.1
scaffold494	Augustus	exon	42316	42503	.	-	.	ID=Dca43398.1.exon2;Parent=Dca43398.1
scaffold494	Augustus	exon	43849	44077	.	-	.	ID=Dca43398.1.exon3;Parent=Dca43398.1
scaffold494	Augustus	exon	45020	45185	.	-	.	ID=Dca43398.1.exon4;Parent=Dca43398.1
scaffold494	Augustus	exon	45291	45322	.	-	.	ID=Dca43398.1.exon5;Parent=Dca43398.1
scaffold494	Augustus	mRNA	37822	45322	.	-	.	ID=Dca43398.2;Parent=Dca43398
scaffold494	Augustus	exon	37822	38034	.	-	.	ID=Dca43398.2.exon1;Parent=Dca43398.2
scaffold494	Augustus	exon	42316	42503	.	-	.	ID=Dca43398.2.exon2;Parent=Dca43398.2
scaffold494	Augustus	exon	42656	42884	.	-	.	ID=Dca43398.2.exon3;Parent=Dca43398.2
scaffold494	Augustus	exon	43919	44077	.	-	.	ID=Dca43398.2.exon4;Parent=Dca43398.2
scaffold494	Augustus	exon	45020	45185	.	-	.	ID=Dca43398.2.exon5;Parent=Dca43398.2
scaffold494	Augustus	exon	45291	45322	.	-	.	ID=Dca43398.2.exon6;Parent=Dca43398.2