Carnation DB

Dca43438.1

Annotation

10-exons
f-1
sp|D7SN59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g01240#GO:0005622;GO:0008270#1F0P1C
sp|B9HQL3_POPTR#Histone deacetylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HDT901#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold495)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43438.1	6	292	293	44.7	287	38	3e-31
Target_name	Start	End	Length	Cov(%)
sp\|D7SN59_VITVI	3	352	353	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43438.1	6	292	293	35.83	287	33	2e-22
Target_name	Start	End	Length	Cov(%)
AT5G03740.1	3	292	294	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold495	Augustus	mRNA	73742	77533	.	+	.	ID=Dca43438.1;Parent=Dca43438
scaffold495	Augustus	exon	73742	73763	.	+	.	ID=Dca43438.1.exon1;Parent=Dca43438.1
scaffold495	Augustus	exon	75073	75143	.	+	.	ID=Dca43438.1.exon2;Parent=Dca43438.1
scaffold495	Augustus	exon	75235	75508	.	+	.	ID=Dca43438.1.exon3;Parent=Dca43438.1
scaffold495	Augustus	exon	75620	75625	.	+	.	ID=Dca43438.1.exon4;Parent=Dca43438.1
scaffold495	Augustus	exon	75715	75762	.	+	.	ID=Dca43438.1.exon5;Parent=Dca43438.1
scaffold495	Augustus	exon	75841	75986	.	+	.	ID=Dca43438.1.exon6;Parent=Dca43438.1
scaffold495	Augustus	exon	76582	76650	.	+	.	ID=Dca43438.1.exon7;Parent=Dca43438.1
scaffold495	Augustus	exon	76734	76824	.	+	.	ID=Dca43438.1.exon8;Parent=Dca43438.1
scaffold495	Augustus	exon	77288	77381	.	+	.	ID=Dca43438.1.exon9;Parent=Dca43438.1
scaffold495	Augustus	exon	77473	77533	.	+	.	ID=Dca43438.1.exon10;Parent=Dca43438.1