Dca43439.1
Annotation
- 3-exons
- f-1
- sp|G7IF06_MEDTR#U4/U6 small nuclear ribonucleoprotein Prp3#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_1g115920#GO:0030529;GO:0003676#1F0P1C
- Repeat List (scaffold495)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43439.1 |
25 |
120 |
120 |
39.16 |
96 |
47 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D5ABW9_PICSI |
235 |
334 |
334 |
29.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43439.1 |
72 |
98 |
120 |
18.33 |
27 |
82 |
4e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0564200-01 |
276 |
302 |
305 |
8.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold495 |
Augustus |
mRNA |
78429 |
82374 |
. |
- |
. |
ID=Dca43439.1;Parent=Dca43439 |
| scaffold495 |
Augustus |
exon |
78429 |
78895 |
. |
- |
. |
ID=Dca43439.1.exon1;Parent=Dca43439.1 |
| scaffold495 |
Augustus |
exon |
80396 |
80478 |
. |
- |
. |
ID=Dca43439.1.exon2;Parent=Dca43439.1 |
| scaffold495 |
Augus-PASA |
exon |
81995 |
82374 |
. |
- |
. |
ID=Dca43439.1.exon3;Parent=Dca43439.1 |
