Dca43440.1
Annotation
- 4-exons
- f-1
- sp|B9MYK3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_741667#GO:0005634;GO:0000166;GO:0003723;GO:0008270#3F0P1C
- Os09t0491756-02 U2 snRNP auxiliary factor, small subunit.
- Repeat List (scaffold495)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43440.1 |
1 |
178 |
178 |
93.25 |
178 |
94 |
3e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MYK3_POPTR |
1 |
178 |
179 |
99.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43440.1 |
1 |
178 |
178 |
85.39 |
178 |
86 |
1e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0491756-02 |
1 |
178 |
291 |
61.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold495 |
Augustus |
mRNA |
82477 |
85645 |
. |
- |
. |
ID=Dca43440.1;Parent=Dca43440 |
| scaffold495 |
Augustus |
exon |
82477 |
82607 |
. |
- |
. |
ID=Dca43440.1.exon1;Parent=Dca43440.1 |
| scaffold495 |
Augustus |
exon |
82763 |
82844 |
. |
- |
. |
ID=Dca43440.1.exon2;Parent=Dca43440.1 |
| scaffold495 |
Augustus |
exon |
82954 |
83040 |
. |
- |
. |
ID=Dca43440.1.exon3;Parent=Dca43440.1 |
| scaffold495 |
Augustus |
exon |
85409 |
85645 |
. |
- |
. |
ID=Dca43440.1.exon4;Parent=Dca43440.1 |
