Dca43449.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4950)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43449.1 |
1 |
110 |
395 |
10.88 |
110 |
39 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
267 |
366 |
1313 |
7.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43449.1 |
98 |
393 |
395 |
29.11 |
296 |
39 |
1e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
891 |
1183 |
1428 |
20.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4950 |
Augustus |
mRNA |
14821 |
17717 |
. |
+ |
. |
ID=Dca43449.1;Parent=Dca43449 |
| scaffold4950 |
Augustus |
exon |
14821 |
15166 |
. |
+ |
. |
ID=Dca43449.1.exon1;Parent=Dca43449.1 |
| scaffold4950 |
Augustus |
exon |
16876 |
17717 |
. |
+ |
. |
ID=Dca43449.1.exon2;Parent=Dca43449.1 |
